GGBN Object - https://id.ggbn.org/32WB38 https://id.ggbn.org/32WB38

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Material Entity: tissue

Disposition: In collection

Identifier Status: ACTIVE

Last Update: January 29, 2025

Identification

Accepted NameAbagrotis placida Grote, 1876
TaxonomyAnimalia > Arthropoda > Insecta > Lepidoptera > Noctuidae > Abagrotis
Name According toCatalogue of Life
Original NameAbagrotis placida
Taxonomy Original NameAnimalia > Arthropoda > Insecta > Lepidoptera > Noctuidae > Abagrotis > placida
Status Original Nameaccepted species
Resolving Stateresolved on species level

Gathering

CountryUnited States (Central or North America)
Localitynr. Haines, Haines hwy mi. 8.5
Latitude | Longitude59.2706 | -135.64658
Collector(s)Collector(s): Kenelm W. Philip
Collector's numbers.n.
Collection Date2006-08-10
Collecting Sourcewild

Tissue

GUID/Occurrence IDhttp://arctos.database.museum/guid/UAM:Ento:413363?pid=26852707
Catalog NumberUAM:Ento:413363
Previous IDsBoLD barcode ID=UAMIC3084-15; GenBank=KU873942; Kenelm W. Philip Lepidoptera Collection (KWP)=14412,
Collection CodeEnto
Institution CodeUAM
Institution Full NameArctos/University of Alaska Museum of the North
Record BasisMaterialSample
Sample Typetissue
Establishment Meanswild caught
Type Statusvoucher of Abagrotis placida in Sikes et al. 2017; voucher of Abagrotis placida in Pohl et al. 2018

Preparation

TypeDNA extraction
StaffKyndall Hildebrandt

Permits

Status: Permit not available
Unknown permit type

Sequences

BOLD number(s)UAMIC3084-15
ENA number(s)KU873942 , UAMIC3084-15
NCBI number(s)KU873942 , UAMIC3084-15

Publications

Sikes, DS. et al., 2017. Building a DNA barcode library of Alaska's non-marine arthropods. Genome, 60(3), pp. 248–259

Climate change may result in ecological futures with novel species assemblages, trophic mismatch, and mass extinction. Alaska has a limited taxonomic workforce to address these changes. We are building a DNA barcode library to facilitate a metabarcoding approach to monitoring non-marine arthropods. Working with the Canadian Centre for DNA Barcoding, we obtained DNA barcodes from recently collected and authoritatively identified specimens in the University of Alaska Museum (UAM) Insect Collection and the Kenai National Wildlife Refuge collection. We submitted tissues from 4776 specimens, of which 81% yielded DNA barcodes representing 1662 species and 1788 Barcode Index Numbers (BINs), of primarily terrestrial, large-bodied arthropods. This represents 84% of the species available for DNA barcoding in the UAM Insect Collection. There are now 4020 Alaskan arthropod species represented by DNA barcodes, after including all records in Barcode of Life Data Systems (BOLD) of species that occur in Alaska - i.e., 48.5% of the 8277 Alaskan, non-marine-arthropod, named species have associated DNA barcodes. An assessment of the identification power of the library in its current state yielded fewer species-level identifications than expected, but the results were not discouraging. We believe we are the first to deliberately begin development of a DNA barcode library of the entire arthropod fauna for a North American state or province. Although far from complete, this library will become increasingly valuable as more species are added and costs to obtain DNA sequences fall.

PubMed 4,210 GGBN records

Dataset Description

University of Alaska Museum (UAM) Insect specimens (Arctos) for GGBN

DescriptionThe UAM Insect collection is the northern-most facility of its kind in the United States. 98.5% of our records are from Alaska. Although a young collection (begun in 2000), we have recently surpassed 280,000 records representing over 1.8 million specimens (as of Jan 2018), making this collection among the top ten largest in the US in entomology based on data served to iDigBio. Over 99% of these records have been georeferenced. Over 75% of the pinned collection has been databased; approximately 10% of the wet collection has been databased. At least one specimen of every lowest identification, in both the pinned and wet collections, has been databased so we have a complete online taxon inventory of the collection. 161,627 specimens have been identified to the species level - these represent 3,264 species. Coleoptera, Araneae, Odonata, and Hymenoptera are the most well-curated groups. 70,634 of these specimen records have been cited or otherwise used in 64 peer-reviewed publications. Please use this DOI to cite this collection / dataset: http://dx.doi.org/doi:10.7299/X75D8S0H
RightsTo the extent possible under law, the publisher has waived all rights to these data and has dedicated them to the Public Domain (CC0 1.0). Users may copy, modify, distribute and use the work, including for commercial purposes, without restriction.
CitationUniversity of Alaska Museum Insect Collection (UAM), University of Alaska Fairbanks. http://dx.doi.org/doi:10.7299/X75D8S0H

Contacts

Curator of Insects
Derek Sikes, dssikes@alaska.edu
Genomic Resources Collection Manager
Kyndall Hildebrandt, kbhildebrandt@alaska.edu , 907 Yukon Drive, AK US, 99775-6960, (907) 474-6914
Information Architect
John Wieczorek, gtuco.btuco@gmail.com , Bariloche, Río Negro AR, 8401
Arctos Database Programmer
Dusty McDonald, dustymc@gmail.com

Loan information

not blocked tissue available for loan

Disposition: In collection

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