GGBN Object - https://id.ggbn.org/2ZC52H https://id.ggbn.org/2ZC52H

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Material Entity: culture

Disposition: In collection

Identifier Status: ACTIVE

Last Update: January 29, 2025

Identification

Accepted NameRamlibacter solisilvae Lee et al., 2014
TaxonomyRamlibacter
Name According toProkaryotic Nomenclature Up-to-Date (PNU)
Original NameRamlibacter solisilvae Lee et al. 2014
Taxonomy Original NameBacteria > Comamonadaceae
Status Original Nameaccepted species
Resolving Stateresolved on species level

Gathering

CountryViet Nam (Asia)
LocalityBac Kan Province
Biotopeforest soil
Collector(s)N/A
Collector's numbers.n.
Collection DateN/A
Collecting Sourcecaptive/cultivated

Culture

Catalog NumberDSM 29042
Collection CodeProkarya
Institution CodeDSMZ
Institution Full NameLeibniz Institute DSMZ
Record BasisLivingSpecimen
Sample Typeculture
Establishment Meansnot provided
Type StatusType

Preparation

Type(vacuum) dried culture

Sequences

ENA number(s)KC569791
NCBI number(s)KC569791

Publications

Lee, HJ. et al., 2014. Ramlibacter solisilvae sp. nov., isolated from forest soil, and emended description of the genus Ramlibacter. International journal of systematic and evolutionary microbiology, 64(Pt 4), pp. 1317–1322

A Gram-staining-negative, strictly aerobic, white-colony-forming bacterium, designated strain 5-10(T), was isolated from forest soil of Bac Kan Province in Vietnam. Cells were non-motile rods or coccoids, showing oxidase- and catalase-positive reactions. Growth was observed at 10-37 °C (optimum, 30 °C), at pH 5.0-9.0 (optimum, pH 7.0) and in the presence of 0-1.0 % (w/v) NaCl (optimum, 0-0.5 %). The major cellular fatty acids were summed feature 3 (comprising C16 : 1ω6c and/or C16 : 1ω7c), C16 : 0, C10 : 0 3-OH and summed feature 8 (comprising C18 : 1ω6c and/or C18 : 1ω7c). The G+C content of the genomic DNA was 69.9 mol% and the only respiratory quinone detected was ubiquinone 8 (Q-8). Phylogenetic analysis based on 16S rRNA gene sequences showed that strain 5-10(T) formed a tight phyletic lineage with members of the genus Ramlibacter. Strain 5-10(T) was most closely related to Ramlibacter tataouinensis TTB310(T) (97.3 %), but the DNA-DNA relatedness level between the two strains was 38.2±1.8 %. Based on phenotypic, chemotaxonomic and molecular features, strain 5-10(T) was shown to represent a novel species of the genus Ramlibacter, for which the name Ramlibacter solisilvae sp. nov. is proposed. The type strain is 5-10(T) ( = KACC 17567(T) = JCM 19319(T)). An emended description of the genus Ramlibacter is also proposed.

PubMed

Dataset Description

DSMZ Prokarya Collection Catalogue

DescriptionThe catalogue contains all strains (of the Bacteria and Archaea collection)
RightsThe copyright for any material created by the DSMZ is reserved. The duplication or use of information and data such as texts or images is only permitted with the indication of the source or with prior approval by the DSMZ.

Contacts

Administrative
Dr. Dorothea Gleim, dgl@dsmz.de , Leibniz-Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH, Inhoffenstr. 7 B, 38124 Braunschweig, GERMANY, +49 531 2616317
Technical
Carola Söhngen, cas11@dsmz.de , Leibniz-Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH, Inhoffenstr. 7 B, 38124 Braunschweig, GERMANY, +49 531 2616 373
no coordinates provided

Loan information

not blocked culture available for loan

Disposition: In collection

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