GGBN Object - https://id.ggbn.org/2ZBZ6Q https://id.ggbn.org/2ZBZ6Q

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Material Entity: culture

Disposition: In collection

Identifier Status: ACTIVE

Last Update: January 29, 2025

Identification

Accepted NameVirgibacillus olivae Quesada et al., 2007
TaxonomyVirgibacillus
Name According toProkaryotic Nomenclature Up-to-Date (PNU)
Original NameVirgibacillus olivae Quesada et al. 2007
Taxonomy Original NameBacteria > Bacillaceae
Status Original Nameaccepted species
Resolving Stateresolved on species level

Gathering

CountrySpain (Europe)
LocalityLa Roda, Sevilla
BiotopeSpanish green olive processing, waste water
Collector(s)N/A
Collector's numbers.n.
Collection DateN/A
Collecting Sourcecaptive/cultivated

Culture

Catalog NumberDSM 18098
Collection CodeProkarya
Institution CodeDSMZ
Institution Full NameLeibniz Institute DSMZ
Record BasisLivingSpecimen
Sample Typeculture
Establishment Meansnot provided
Type StatusType

Preparation

Type(vacuum) dried culture
StaffT. Quesada

Sequences

ENA number(s)DQ139839
NCBI number(s)DQ139839

Publications

Quesada, T. et al., 2007. Virgibacillus olivae sp. nov., isolated from waste wash-water from processing of Spanish-style green olives. International journal of systematic and evolutionary microbiology, 57(Pt 5), pp. 906–910

Four bacterial strains (E(30)8(T), E(55)49, I(30)77 and N(30)129) were isolated from the residual wash-water produced during the processing of Spanish-style green table olives. The isolates were subjected to a polyphasic taxonomic study using phenotypic, phylogenetic and genotypic methods. The bacteria were Gram-positive, spore-forming rods. Moreover, they were heterotrophs that were able to utilize cellobiose, glucose, mannose and rhamnose as carbon sources. The G+C content of their genomic DNA ranged from 30.7 to 33.4 mol%. The major cellular fatty acids found in strain E(30)8(T) were iso-C(15 : 0), anteiso-C(15 : 0), iso-C(17 : 0) and anteiso-C(17 : 0). DNA-DNA hybridization shows 76.2-88.3 % relatedness among the four strains. The 16S rRNA gene sequence of isolate E(30)8(T) shows that it belongs to the genus Virgibacillus, with the highest sequence similarity (99 %) to Virgibacillus marismortui 123(T). However, phenotypic differences and DNA-DNA relatedness between strain E(30)8(T) and V. marismortui ATCC 700626(T) of less than 47 % suggest the placement of these strains within a novel species of the genus Virgibacillus. The name Virgibacillus olivae sp. nov. is proposed, with strain E(30)8(T) (=LMG 23503(T)=DSM 18098(T)) as the type strain.

PubMed

Dataset Description

DSMZ Prokarya Collection Catalogue

DescriptionThe catalogue contains all strains (of the Bacteria and Archaea collection)
RightsThe copyright for any material created by the DSMZ is reserved. The duplication or use of information and data such as texts or images is only permitted with the indication of the source or with prior approval by the DSMZ.

Contacts

Administrative
Dr. Dorothea Gleim, dgl@dsmz.de , Leibniz-Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH, Inhoffenstr. 7 B, 38124 Braunschweig, GERMANY, +49 531 2616317
Technical
Carola Söhngen, cas11@dsmz.de , Leibniz-Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH, Inhoffenstr. 7 B, 38124 Braunschweig, GERMANY, +49 531 2616 373
no coordinates provided

Loan information

not blocked culture available for loan

Disposition: In collection

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